Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | SD1D_RS03430 | Not Available | Negative | 748075 - 749454 | 51666.3 |
| carboxypeptidase m32 | SD1D_RS03435 | Not Available | Negative | 749656 - 751161 | 58676.5 |
| phosphopyruvate hydratase | SD1D_RS03440 | Not Available | Positive | 751533 - 752843 | 47229.2 |
| calcium-translocating p-type atpase, pmca-type | SD1D_RS03445 | Not Available | Negative | 752873 - 755533 | 96635.2 |
| mate family efflux transporter | SD1D_RS03450 | Not Available | Positive | 755733 - 757094 | 49657.5 |
| deda family protein | SD1D_RS03455 | Not Available | Negative | 757096 - 757713 | 22767.3 |
| leucine--trna ligase | SD1D_RS03460 | Not Available | Positive | 758160 - 760568 | 91607.6 |
| cdp-alcohol phosphatidyltransferase family protein | SD1D_RS03465 | Not Available | Positive | 760958 - 761572 | 23445.7 |
| hypothetical protein | SD1D_RS03470 | Not Available | Negative | 761622 - 761891 | 10251.8 |
| hypothetical protein | SD1D_RS03475 | Not Available | Negative | 761896 - 762618 | 27690.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
