Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubrerythrin family protein | SD1D_RS03195 | Not Available | Negative | 691911 - 692453 | 20613.3 |
| duf2935 domain-containing protein | SD1D_RS03200 | Not Available | Negative | 692522 - 693334 | 31722.2 |
| yitt family protein | SD1D_RS03205 | Not Available | Negative | 693382 - 694251 | 31751.7 |
| hypothetical protein | SD1D_RS03215 | Not Available | Positive | 694472 - 695356 | 32438.0 |
| gnat family n-acetyltransferase | SD1D_RS03220 | Not Available | Positive | 695493 - 696353 | 33167.8 |
| response regulator transcription factor | SD1D_RS03225 | Not Available | Positive | 696567 - 697244 | 25886.6 |
| atp-binding protein | SD1D_RS03230 | Not Available | Positive | 697241 - 698743 | 57971.9 |
| hypothetical protein | SD1D_RS03235 | Not Available | Positive | 698860 - 699579 | 27365.7 |
| ph domain-containing protein | SD1D_RS03240 | Not Available | Positive | 699622 - 699999 | 14880.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 700550 - 702082 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
