Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | SD1D_RS03050 | Not Available | Positive | 652525 - 653601 | 39580.5 |
| gfo/idh/moca family protein | SD1D_RS03055 | Not Available | Positive | 653670 - 654830 | 43156.5 |
| gfo/idh/moca family protein | SD1D_RS03060 | Not Available | Positive | 654940 - 656118 | 44854.7 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | SD1D_RS03065 | Not Available | Positive | 656204 - 658153 | 75525.9 |
| hypothetical protein | SD1D_RS12255 | Not Available | Negative | 658208 - 658369 | 6091.21 |
| hypothetical protein | SD1D_RS03070 | Not Available | Negative | 658382 - 658615 | 8814.26 |
| hypothetical protein | SD1D_RS03075 | Not Available | Positive | 658777 - 659415 | 24181.7 |
| homocysteine s-methyltransferase family protein | SD1D_RS03080 | Not Available | Positive | 659402 - 661867 | 90387.5 |
| glycosyltransferase family 2 protein | SD1D_RS03085 | Not Available | Positive | 661886 - 662839 | 36945.9 |
| glycosyltransferase family 2 protein | SD1D_RS03090 | Not Available | Positive | 662864 - 663793 | 35522.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
