Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m15 family metallopeptidase | SD1D_RS02695 | Not Available | Positive | 568108 - 568854 | 29186.8 |
| serine racemase vant catalytic subunit | SD1D_RS02700 | Not Available | Positive | 568859 - 571012 | 81124.1 |
| hypothetical protein | SD1D_RS02705 | Not Available | Positive | 571173 - 571697 | 19041.8 |
| folate family ecf transporter s component | SD1D_RS02710 | Not Available | Negative | 571706 - 572266 | 20740.6 |
| duf362 domain-containing protein | SD1D_RS02715 | Not Available | Positive | 572616 - 573683 | 38849.2 |
| hypothetical protein | SD1D_RS02720 | Not Available | Positive | 573859 - 574029 | 6291.73 |
| rtcb family protein | SD1D_RS02725 | Not Available | Positive | 574029 - 575231 | 45152.4 |
| eama family transporter | SD1D_RS02730 | Not Available | Negative | 575341 - 576249 | 33124.4 |
| superoxide dismutase | SD1D_RS02735 | Not Available | Negative | 576477 - 577103 | 23471.3 |
| p-ii family nitrogen regulator | SD1D_RS02740 | Not Available | Negative | 577432 - 578130 | 25161.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
