Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor-like helix-turn-helix dna-binding protein | SD1D_RS07425 | Not Available | Positive | 1590477 - 1590914 | 16330.3 |
| Terminase large subunit | SD1D_RS07430 | Not Available | Negative | 1590915 - 1592519 | 60474.4 |
| duf5049 domain-containing protein | SD1D_RS07435 | Not Available | Negative | 1592598 - 1592786 | 7306.58 |
| Gp514 | SD1D_RS07440 | Not Available | Negative | 1592779 - 1593237 | 17020.5 |
| Amidoligase family protein | SD1D_RS07445 | Not Available | Negative | 1593282 - 1594181 | 34352.2 |
| Hypothetical protein | SD1D_RS07450 | Not Available | Negative | 1594324 - 1594548 | 8444.08 |
| hypothetical protein | SD1D_RS07455 | Not Available | Negative | 1594541 - 1595230 | 25372.3 |
| Dna modification methylase | SD1D_RS07460 | Not Available | Negative | 1595321 - 1596556 | 46274.4 |
| p27 family phage terminase small subunit | SD1D_RS07465 | Not Available | Negative | 1596560 - 1597138 | 21305.3 |
| Transposase/is protein | SD1D_RS07470 | Not Available | Negative | 1597397 - 1598083 | 26198.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
