Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate, phosphate dikinase | SD1D_RS02345 | Not Available | Positive | 489510 - 492131 | 96851.7 |
| abc transporter atp-binding protein | SD1D_RS02350 | Not Available | Negative | 492309 - 492935 | 23558.0 |
| hypothetical protein | SD1D_RS02355 | Not Available | Negative | 492954 - 494837 | 72448.5 |
| galactokinase | SD1D_RS02360 | Not Available | Positive | 495553 - 496740 | 44244.3 |
| hypothetical protein | SD1D_RS02365 | Not Available | Positive | 496868 - 497158 | 10771.4 |
| sodium ion-translocating decarboxylase subunit beta | SD1D_RS02370 | Not Available | Positive | 497180 - 497476 | 10811.8 |
| mate family efflux transporter | SD1D_RS02375 | Not Available | Positive | 497711 - 499045 | 49188.7 |
| hypothetical protein | SD1D_RS12795 | Not Available | Positive | 499070 - 499237 | 6186.48 |
| abc transporter atp-binding protein | SD1D_RS02380 | Not Available | Positive | 499234 - 500241 | 37380.8 |
| abc transporter permease | SD1D_RS02385 | Not Available | Positive | 500241 - 501185 | 34385.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
