Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrb/uvrc motif-containing protein | SD1D_RS02045 | Not Available | Positive | 421825 - 422370 | 20495.4 |
| protein arginine kinase | SD1D_RS02050 | Not Available | Positive | 422363 - 423397 | 39035.1 |
| atp-dependent clp protease atp-binding subunit | SD1D_RS02055 | Not Available | Positive | 423611 - 426055 | 91056.2 |
| hypothetical protein | SD1D_RS02060 | Not Available | Positive | 426146 - 426559 | 15849.0 |
| dna repair protein rada | SD1D_RS02065 | Not Available | Positive | 426561 - 427928 | 49422.3 |
| Trna-trp | Not Available | Not Available | Positive | 428094 - 428166 | Not Available |
| panacea domain-containing protein | SD1D_RS02075 | Not Available | Positive | 428447 - 428914 | 18531.9 |
| hypothetical protein | SD1D_RS12095 | Not Available | Positive | 428918 - 429085 | 6705.88 |
| duf4234 domain-containing protein | SD1D_RS02080 | Not Available | Negative | 429119 - 429451 | 12702.6 |
| duf2752 domain-containing protein | SD1D_RS02085 | Not Available | Negative | 429463 - 429888 | 16319.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
