Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar export chaperone flis | SD1D_RS01845 | Not Available | Positive | 373921 - 374289 | 14160.3 |
| hypothetical protein | SD1D_RS01850 | Not Available | Positive | 374305 - 374799 | 19204.9 |
| flagellin | SD1D_RS01855 | Not Available | Positive | 374960 - 375928 | 34858.6 |
| substrate-binding domain-containing protein | SD1D_RS01860 | Not Available | Positive | 376116 - 376433 | 12350.3 |
| glycosyltransferase family 2 protein | SD1D_RS01865 | Not Available | Positive | 376765 - 377817 | 40795.7 |
| hypothetical protein | SD1D_RS01870 | Not Available | Positive | 377877 - 378251 | 14308.6 |
| is6 family transposase | SD1D_RS01875 | Not Available | Negative | 378416 - 379465 | 41126.2 |
| hypothetical protein | SD1D_RS01880 | Not Available | Positive | 379628 - 380428 | 31419.9 |
| hypothetical protein | SD1D_RS01885 | Not Available | Positive | 380575 - 382509 | 71598.0 |
| hypothetical protein | SD1D_RS01890 | Not Available | Positive | 382534 - 383442 | 35157.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
