Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slc13 family permease | SD1D_RS01795 | Not Available | Positive | 363367 - 364536 | 41631.3 |
| flagellar biosynthesis anti-sigma factor flgm | SD1D_RS01800 | Not Available | Positive | 364724 - 365002 | 10756.7 |
| flagellar protein flgn | SD1D_RS01805 | Not Available | Positive | 365024 - 365536 | 19193.2 |
| flagellar hook-associated protein flgk | SD1D_RS01810 | Not Available | Positive | 365562 - 367292 | 65332.1 |
| flagellar hook-associated protein flgk | SD1D_RS01815 | Not Available | Positive | 367304 - 369160 | 68827.1 |
| flagellar hook-associated protein flgl | SD1D_RS01820 | Not Available | Positive | 369179 - 370675 | 57217.0 |
| flagellar assembly protein fliw | SD1D_RS01825 | Not Available | Positive | 370713 - 371186 | 17947.4 |
| carbon storage regulator csra | SD1D_RS01830 | Not Available | Positive | 371180 - 371401 | 8103.99 |
| flagellar protein flag | SD1D_RS01835 | Not Available | Positive | 371547 - 371933 | 14759.4 |
| flagellar filament capping protein flid | SD1D_RS01840 | Not Available | Positive | 371945 - 373903 | 72145.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
