Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l18 | SD1D_RS01645 | Not Available | Positive | 339831 - 340199 | 13612.5 |
| 30s ribosomal protein s5 | SD1D_RS01650 | Not Available | Positive | 340216 - 340719 | 17788.9 |
| 50s ribosomal protein l30 | SD1D_RS01655 | Not Available | Positive | 340756 - 340938 | 6658.51 |
| 50s ribosomal protein l15 | SD1D_RS01660 | Not Available | Positive | 340966 - 341403 | 15447.6 |
| preprotein translocase subunit secy | SD1D_RS01665 | Not Available | Positive | 341405 - 342742 | 48860.1 |
| adenylate kinase | SD1D_RS01670 | Not Available | Positive | 342893 - 343537 | 24553.8 |
| type i methionyl aminopeptidase | SD1D_RS01675 | Not Available | Positive | 343568 - 344320 | 27936.5 |
| kow domain-containing rna-binding protein | SD1D_RS01680 | Not Available | Positive | 344338 - 344619 | 10874.2 |
| translation initiation factor if-1 | SD1D_RS01685 | Not Available | Positive | 344619 - 344837 | 8220.12 |
| 50s ribosomal protein l36 | SD1D_RS01690 | Not Available | Positive | 344981 - 345094 | 4335.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
