Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpm domain-containing protein | SD1D_RS01545 | Not Available | Negative | 328515 - 329417 | 34194.8 |
| hypothetical protein | SD1D_RS01550 | Not Available | Negative | 329414 - 330556 | 43608.0 |
| pspa/im30 family protein | SD1D_RS01555 | Not Available | Negative | 330634 - 331308 | 24848.5 |
| 30s ribosomal protein s10 | SD1D_RS01560 | Not Available | Positive | 331932 - 332249 | 11931.8 |
| 50s ribosomal protein l3 | SD1D_RS01565 | Not Available | Positive | 332397 - 333029 | 22579.5 |
| 50s ribosomal protein l4 | SD1D_RS01570 | Not Available | Positive | 333054 - 333674 | 22958.9 |
| 50s ribosomal protein l23 | SD1D_RS01575 | Not Available | Positive | 333674 - 333973 | 11133.6 |
| 50s ribosomal protein l2 | SD1D_RS01580 | Not Available | Positive | 334055 - 334897 | 30498.2 |
| 30s ribosomal protein s19 | SD1D_RS01585 | Not Available | Positive | 334948 - 335229 | 10582.8 |
| 50s ribosomal protein l22 | SD1D_RS01590 | Not Available | Positive | 335261 - 335644 | 14507.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
