Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SD1D_RS01500 | Not Available | Negative | 318497 - 319729 | 47013.7 |
| atp-binding cassette domain-containing protein | SD1D_RS01505 | Not Available | Negative | 319710 - 320612 | 33893.1 |
| duf5050 domain-containing protein | SD1D_RS01510 | Not Available | Negative | 320627 - 321763 | 43251.3 |
| hypothetical protein | SD1D_RS01515 | Not Available | Negative | 321893 - 322273 | 14068.5 |
| duf5050 domain-containing protein | SD1D_RS01520 | Not Available | Negative | 322436 - 323572 | 43321.1 |
| hypothetical protein | SD1D_RS12090 | Not Available | Negative | 324571 - 324750 | 6274.52 |
| transposase | SD1D_RS01525 | Not Available | Positive | 325007 - 325399 | 14975.9 |
| is3 family transposase | SD1D_RS01530 | Not Available | Positive | 325616 - 325894 | 11236.7 |
| spfh domain-containing protein | SD1D_RS01535 | Not Available | Negative | 326122 - 327090 | 35812.1 |
| hypothetical protein | SD1D_RS01540 | Not Available | Negative | 327155 - 328483 | 50652.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
