Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxc | SD1D_RS01400 | Not Available | Positive | 293525 - 294838 | 47397.1 |
| rnfabcdge type electron transport complex subunit d | SD1D_RS01405 | Not Available | Positive | 294906 - 295901 | 35135.1 |
| fmn-binding protein | SD1D_RS01410 | Not Available | Positive | 295891 - 296538 | 22864.9 |
| electron transport complex subunit rsxe | SD1D_RS01415 | Not Available | Positive | 296531 - 297208 | 24016.3 |
| electron transport complex subunit rsxa | SD1D_RS01420 | Not Available | Positive | 297209 - 297799 | 21304.9 |
| rnfabcdge type electron transport complex subunit b | SD1D_RS01425 | Not Available | Positive | 297815 - 298645 | 28565.1 |
| helix-turn-helix domain-containing protein | SD1D_RS01430 | Not Available | Negative | 298739 - 300010 | 49046.9 |
| s8 family serine peptidase | SD1D_RS01435 | Not Available | Positive | 300290 - 302512 | 81977.2 |
| 50s ribosomal protein l33 | SD1D_RS01440 | Not Available | Positive | 302704 - 302853 | 6043.51 |
| preprotein translocase subunit sece | SD1D_RS01445 | Not Available | Positive | 302879 - 303091 | 7887.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
