Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| desulfoferrodoxin family protein | SD1D_RS01350 | Not Available | Positive | 285425 - 285811 | 14666.8 |
| crp/fnr family transcriptional regulator | SD1D_RS01355 | Not Available | Positive | 285930 - 286604 | 26176.8 |
| mbl fold metallo-hydrolase rna specificity domain-containing protein | SD1D_RS01360 | Not Available | Positive | 286651 - 288240 | 59266.3 |
| vwa domain-containing protein | SD1D_RS01365 | Not Available | Negative | 288323 - 288952 | 23793.3 |
| hypothetical protein | SD1D_RS01370 | Not Available | Positive | 289073 - 289696 | 24230.2 |
| yccf domain-containing protein | SD1D_RS01375 | Not Available | Positive | 289730 - 290089 | 12736.5 |
| gnat family n-acetyltransferase | SD1D_RS01380 | Not Available | Positive | 290118 - 291029 | 35692.0 |
| hypothetical protein | SD1D_RS01385 | Not Available | Positive | 291316 - 291957 | 23753.6 |
| rok family protein | SD1D_RS01390 | Not Available | Negative | 292012 - 292890 | 31840.7 |
| sporulation transcriptional regulator spoiiid | SD1D_RS01395 | Not Available | Positive | 293067 - 293327 | 9858.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
