Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mgtc/sapb family protein | SD1D_RS01155 | Not Available | Positive | 240471 - 241178 | 25974.2 |
| branched-chain amino acid transport system ii carrier protein | SD1D_RS01160 | Not Available | Positive | 241353 - 242705 | 49449.2 |
| abc transporter permease | SD1D_RS12365 | Not Available | Positive | 242745 - 243293 | 20585.8 |
| hypothetical protein | SD1D_RS01165 | Not Available | Positive | 243257 - 243727 | 17465.4 |
| cellulase family glycosylhydrolase | SD1D_RS01170 | Not Available | Negative | 243804 - 245540 | 64740.6 |
| cellulase family glycosylhydrolase | SD1D_RS01175 | Not Available | Positive | 245791 - 247212 | 52020.2 |
| gnat family n-acetyltransferase | SD1D_RS01180 | Not Available | Positive | 247766 - 248038 | 10335.4 |
| duf3784 domain-containing protein | SD1D_RS12790 | Not Available | Positive | 248059 - 248337 | 10526.4 |
| hypothetical protein | SD1D_RS01190 | Not Available | Positive | 248258 - 248803 | 20646.5 |
| fmn-dependent nadh-azoreductase | SD1D_RS01195 | Not Available | Negative | 248904 - 249575 | 25882.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
