Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | SD1D_RS01105 | Not Available | Positive | 231548 - 232714 | 44718.1 |
| hypothetical protein | SD1D_RS12535 | Not Available | Negative | 233112 - 233246 | 5343.98 |
| hypothetical protein | SD1D_RS12355 | Not Available | Positive | 234085 - 234288 | 7487.07 |
| nucleoside phosphorylase | SD1D_RS01120 | Not Available | Positive | 234621 - 235391 | 28243.2 |
| hypothetical protein | SD1D_RS01125 | Not Available | Positive | 235431 - 235634 | 8099.63 |
| duf5711 family protein | SD1D_RS01130 | Not Available | Negative | 235792 - 236952 | 44504.2 |
| helix-turn-helix domain-containing protein | SD1D_RS01135 | Not Available | Positive | 237316 - 237921 | 23014.6 |
| hypothetical protein | SD1D_RS01140 | Not Available | Positive | 237960 - 238316 | 14287.9 |
| flavodoxin domain-containing protein | SD1D_RS01145 | Not Available | Positive | 238366 - 238848 | 18217.6 |
| amidohydrolase family protein | SD1D_RS01150 | Not Available | Positive | 238999 - 239961 | 36124.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
