Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding s4 domain-containing protein | SD1D_RS00905 | Not Available | Positive | 187369 - 187608 | 8819.06 |
| sporulation protein yabp | SD1D_RS00910 | Not Available | Positive | 187712 - 187999 | 10499.5 |
| spore cortex biosynthesis protein yabq | SD1D_RS00915 | Not Available | Positive | 188009 - 188569 | 21972.3 |
| ftsb family cell division protein | SD1D_RS00920 | Not Available | Positive | 188591 - 188881 | 11084.4 |
| Trna-met | Not Available | Not Available | Positive | 188961 - 189034 | Not Available |
| stage ii sporulation protein e | SD1D_RS00930 | Not Available | Positive | 189274 - 191562 | 84532.9 |
| trna lysidine(34) synthetase tils | SD1D_RS00935 | Not Available | Positive | 191654 - 193102 | 55774.2 |
| hypoxanthine phosphoribosyltransferase | SD1D_RS00940 | Not Available | Positive | 193102 - 193617 | 19379.5 |
| atp-dependent zinc metalloprotease ftsh | SD1D_RS00945 | Not Available | Positive | 193690 - 195516 | 67362.6 |
| putative abc transporter permease | SD1D_RS00950 | Not Available | Positive | 195892 - 196320 | 16457.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
