Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | SD1D_RS00855 | Not Available | Positive | 177670 - 178845 | 43932.0 |
| d-aminoacyl-trna deacylase | SD1D_RS00860 | Not Available | Positive | 178908 - 179354 | 16645.3 |
| abc transporter atp-binding protein | SD1D_RS00865 | Not Available | Positive | 179495 - 180271 | 29212.6 |
| abc transporter permease | SD1D_RS00870 | Not Available | Positive | 180273 - 181493 | 44743.3 |
| hypothetical protein | SD1D_RS00875 | Not Available | Positive | 181519 - 181788 | 10539.5 |
| s8 family serine peptidase | SD1D_RS00880 | Not Available | Positive | 181923 - 183629 | 62850.6 |
| s8 family peptidase | SD1D_RS00885 | Not Available | Positive | 183654 - 185357 | 62939.6 |
| stage v sporulation protein t | SD1D_RS00890 | Not Available | Positive | 185497 - 186045 | 20340.4 |
| nucleoside triphosphate pyrophosphohydrolase | SD1D_RS00895 | Not Available | Positive | 186197 - 186973 | 29554.2 |
| hu family dna-binding protein | SD1D_RS00900 | Not Available | Positive | 186997 - 187272 | 9791.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
