Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dhh family phosphoesterase | SD1D_RS00760 | Not Available | Positive | 155908 - 157968 | 77627.0 |
| 50s ribosomal protein l9 | SD1D_RS00765 | Not Available | Positive | 157997 - 158443 | 16189.8 |
| replicative dna helicase | SD1D_RS00770 | Not Available | Positive | 158465 - 159793 | 49570.5 |
| helix-turn-helix domain-containing protein | SD1D_RS00775 | Not Available | Positive | 160014 - 160691 | 26812.1 |
| duf362 domain-containing protein | SD1D_RS00780 | Not Available | Negative | 160786 - 160953 | 5564.38 |
| duf1858 domain-containing protein | SD1D_RS00785 | Not Available | Positive | 161155 - 161355 | 7012.57 |
| adaptor protein meca | SD1D_RS00790 | Not Available | Negative | 161430 - 162185 | 28759.8 |
| serine/threonine-protein kinase | SD1D_RS00795 | Not Available | Positive | 162486 - 163856 | 53166.9 |
| hypothetical protein | SD1D_RS00800 | Not Available | Positive | 163832 - 164554 | 28417.7 |
| glycosyl hydrolase family 18 protein | SD1D_RS00805 | Not Available | Positive | 164948 - 166651 | 64671.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
