Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SD1D_RS00350 | Not Available | Positive | 73323 - 73592 | 10733.8 |
| m15 family metallopeptidase | SD1D_RS00355 | Not Available | Positive | 73594 - 74451 | 33482.6 |
| dna polymerase iii subunit gamma/tau | SD1D_RS00360 | Not Available | Positive | 74552 - 76123 | 59116.7 |
| ybab/ebfc family nucleoid-associated protein | SD1D_RS00365 | Not Available | Positive | 76225 - 76578 | 12530.0 |
| recombination mediator recr | SD1D_RS00370 | Not Available | Positive | 76578 - 77174 | 21910.8 |
| class i sam-dependent methyltransferase | SD1D_RS00375 | Not Available | Positive | 78597 - 79253 | 25129.0 |
| hypothetical protein | SD1D_RS00380 | Not Available | Positive | 79277 - 79558 | 10311.2 |
| hypothetical protein | SD1D_RS00385 | Not Available | Positive | 79587 - 80018 | 16627.9 |
| hypothetical protein | SD1D_RS00390 | Not Available | Positive | 80057 - 80443 | 14461.1 |
| vanz family protein | SD1D_RS00395 | Not Available | Positive | 80693 - 81205 | 19991.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
