Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | SD1D_RS00310 | Not Available | Negative | 65486 - 66370 | 33969.6 |
| nicotinamide phosphoribosyltransferase domain-containing protein | SD1D_RS12070 | Not Available | Negative | 66503 - 66646 | 5539.94 |
| hypothetical protein | SD1D_RS00315 | Not Available | Negative | 66688 - 67485 | 29951.4 |
| cysteine hydrolase family protein | SD1D_RS00320 | Not Available | Negative | 67496 - 68017 | 18939.0 |
| hypothetical protein | SD1D_RS00325 | Not Available | Positive | 68252 - 68623 | 13711.6 |
| glycoside hydrolase family 9 protein | SD1D_RS00330 | Not Available | Positive | 68856 - 70916 | 77922.5 |
| hypothetical protein | SD1D_RS12075 | Not Available | Positive | 71269 - 71457 | 7180.69 |
| Trna-gly | Not Available | Not Available | Positive | 71449 - 71519 | Not Available |
| peptidoglycan dd-metalloendopeptidase family protein | SD1D_RS00340 | Not Available | Positive | 71713 - 72582 | 31533.3 |
| transcription repressor nadr | SD1D_RS00345 | Not Available | Negative | 72653 - 73165 | 19524.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
