Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mboat family o-acyltransferase | SD1D_RS05940 | Not Available | Negative | 1287744 - 1288946 | 46254.5 |
| hypothetical protein | SD1D_RS05945 | Not Available | Negative | 1289150 - 1289647 | 18622.2 |
| mfs transporter | SD1D_RS05950 | Not Available | Negative | 1289761 - 1290933 | 42542.3 |
| zinc transporter zupt | SD1D_RS05955 | Not Available | Negative | 1291033 - 1291842 | 28692.5 |
| hypothetical protein | SD1D_RS05960 | Not Available | Negative | 1292076 - 1292654 | 22157.9 |
| cation diffusion facilitator family transporter | SD1D_RS05965 | Not Available | Negative | 1292727 - 1293626 | 33036.0 |
| glycosyltransferase family 8 protein | SD1D_RS05970 | Not Available | Negative | 1293853 - 1294860 | 39377.9 |
| hypothetical protein | SD1D_RS05975 | Not Available | Negative | 1294887 - 1297190 | 90550.4 |
| leucine-rich repeat protein | SD1D_RS05980 | Not Available | Negative | 1297220 - 1299022 | 68511.0 |
| duf4832 domain-containing protein | SD1D_RS05985 | Not Available | Negative | 1299039 - 1300364 | 51780.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
