Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 13015 - 13088 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 13567 - 16466 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 16526 - 16599 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 16717 - 16789 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 16801 - 16873 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 16911 - 16992 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 17051 - 17124 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 17191 - 17263 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 17292 - 17364 | Not Available |
| nad-dependent protein deacylase | SD1D_RS00105 | Not Available | Positive | 17561 - 18277 | 26972.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
