Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SD1D_RS05790 | Not Available | Negative | 1253502 - 1253819 | 12690.0 |
| arsenate reductase family protein | SD1D_RS05795 | Not Available | Negative | 1254166 - 1254510 | 13365.4 |
| putative abc exporter domain-containing protein | SD1D_RS05800 | Not Available | Negative | 1254556 - 1255326 | 28722.9 |
| glycoside hydrolase family 43 protein | SD1D_RS05805 | Not Available | Negative | 1255401 - 1256981 | 60557.3 |
| ig domain-containing protein | SD1D_RS05810 | Not Available | Positive | 1257223 - 1258206 | 34967.3 |
| dicarboxylate/amino acid:cation symporter | SD1D_RS05815 | Not Available | Negative | 1258276 - 1259535 | 44780.6 |
| arac family transcriptional regulator | SD1D_RS05820 | Not Available | Positive | 1259716 - 1260600 | 35203.7 |
| glycoside hydrolase family 10 protein | SD1D_RS05825 | Not Available | Negative | 1260647 - 1261909 | 49157.2 |
| n-acetylmuramoyl-l-alanine amidase | SD1D_RS05830 | Not Available | Negative | 1261980 - 1264733 | 102698.0 |
| trna 2-thiocytidine biosynthesis ttca family protein | SD1D_RS05835 | Not Available | Positive | 1265242 - 1265961 | 27277.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
