Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | SD1D_RS05590 | Not Available | Positive | 1212295 - 1213056 | 28405.8 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | SD1D_RS05595 | Not Available | Positive | 1213120 - 1213464 | 12720.2 |
| yran family protein | SD1D_RS05600 | Not Available | Positive | 1213484 - 1213837 | 13886.0 |
| peptidoglycan editing factor pgef | SD1D_RS05605 | Not Available | Positive | 1213852 - 1214703 | 31033.1 |
| duf512 domain-containing protein | SD1D_RS05610 | Not Available | Positive | 1214742 - 1216055 | 49849.8 |
| ribosome biogenesis gtpase der | SD1D_RS05615 | Not Available | Positive | 1216114 - 1217439 | 49513.7 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | SD1D_RS05620 | Not Available | Positive | 1217442 - 1218071 | 23182.3 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | SD1D_RS05625 | Not Available | Positive | 1218086 - 1219096 | 36266.0 |
| signal peptidase i | SD1D_RS05630 | Not Available | Positive | 1219294 - 1219896 | 23128.8 |
| stage iv sporulation protein a | SD1D_RS05635 | Not Available | Positive | 1220009 - 1221487 | 55661.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
