Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | SD1D_RS05440 | Not Available | Positive | 1182174 - 1183529 | 51107.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SD1D_RS05445 | Not Available | Positive | 1183513 - 1184058 | 20381.8 |
| competence/damage-inducible protein a | SD1D_RS05450 | Not Available | Positive | 1184091 - 1185371 | 46764.9 |
| hypothetical protein | SD1D_RS05455 | Not Available | Positive | 1185475 - 1186140 | 24484.1 |
| nad(p)/fad-dependent oxidoreductase | SD1D_RS05460 | Not Available | Positive | 1186272 - 1187501 | 45527.2 |
| (d)cmp kinase | SD1D_RS05465 | Not Available | Positive | 1187555 - 1188226 | 25016.1 |
| bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30s ribosomal protein s1 | SD1D_RS05470 | Not Available | Positive | 1188252 - 1190204 | 72565.9 |
| cher family methyltransferase | SD1D_RS05475 | Not Available | Positive | 1190243 - 1191022 | 30575.1 |
| phosphate acyltransferase plsx | SD1D_RS05480 | Not Available | Positive | 1191207 - 1192238 | 36728.8 |
| acyl carrier protein | SD1D_RS05485 | Not Available | Positive | 1192241 - 1192471 | 8522.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
