Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnfabcdge type electron transport complex subunit d | SD1D_RS05040 | Not Available | Positive | 1098628 - 1099593 | 34731.5 |
| fmn-binding protein | SD1D_RS05045 | Not Available | Positive | 1099654 - 1100649 | 35492.4 |
| hypothetical protein | SD1D_RS05050 | Not Available | Positive | 1100792 - 1101571 | 28946.0 |
| nusg domain ii-containing protein | SD1D_RS05055 | Not Available | Positive | 1101647 - 1102012 | 13640.8 |
| gx transporter family protein | SD1D_RS05060 | Not Available | Positive | 1102044 - 1102535 | 17676.9 |
| atp-binding protein | SD1D_RS05065 | Not Available | Positive | 1102691 - 1103416 | 26531.2 |
| cysteine synthase a | SD1D_RS05070 | Not Available | Positive | 1103637 - 1104569 | 33249.1 |
| n-acetylmuramoyl-l-alanine amidase | SD1D_RS05075 | Not Available | Positive | 1104685 - 1105227 | 20352.3 |
| yicc/yloc family endoribonuclease | SD1D_RS05080 | Not Available | Positive | 1105386 - 1106267 | 33988.6 |
| duf370 domain-containing protein | SD1D_RS05085 | Not Available | Positive | 1106292 - 1106570 | 9885.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
