Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | SD1D_RS04890 | Not Available | Positive | 1065734 - 1066744 | 37320.8 |
| hypothetical protein | SD1D_RS04895 | Not Available | Positive | 1067094 - 1067402 | 11540.0 |
| v-type atp synthase subunit i | SD1D_RS04900 | Not Available | Positive | 1067441 - 1069471 | 76621.6 |
| v-type atp synthase subunit k | SD1D_RS04905 | Not Available | Positive | 1069455 - 1069946 | 16603.1 |
| v-type atp synthase subunit e | SD1D_RS04910 | Not Available | Positive | 1070038 - 1070634 | 22363.1 |
| v-type atpase subunit | SD1D_RS04915 | Not Available | Positive | 1070683 - 1071651 | 36716.1 |
| v-type atp synthase subunit f | SD1D_RS04920 | Not Available | Positive | 1071644 - 1071964 | 11691.2 |
| v-type atp synthase subunit a | SD1D_RS04925 | Not Available | Positive | 1072001 - 1073761 | 65191.5 |
| v-type atp synthase subunit b | SD1D_RS04930 | Not Available | Positive | 1073761 - 1075134 | 50993.4 |
| v-type atp synthase subunit d | SD1D_RS04935 | Not Available | Positive | 1075149 - 1075814 | 26006.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
