Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator mntr | SD1D_RS04790 | Not Available | Positive | 1040588 - 1041058 | 18365.3 |
| ferrous iron transport protein b | SD1D_RS04795 | Not Available | Negative | 1041165 - 1043279 | 78433.0 |
| ferrous iron transport protein a | SD1D_RS04800 | Not Available | Negative | 1043340 - 1043567 | 8114.08 |
| hypothetical protein | SD1D_RS04805 | Not Available | Negative | 1043788 - 1044852 | 39423.6 |
| undecaprenyl-diphosphate phosphatase | SD1D_RS04810 | Not Available | Positive | 1045107 - 1045925 | 30508.4 |
| gh25 family lysozyme | SD1D_RS04815 | Not Available | Positive | 1046045 - 1047520 | 55683.0 |
| coenzyme f420-0:l-glutamate ligase | SD1D_RS04820 | Not Available | Negative | 1047578 - 1048768 | 43927.5 |
| glycoside hydrolase family 43 protein | SD1D_RS04825 | Not Available | Negative | 1049027 - 1050007 | 36974.9 |
| methyl-accepting chemotaxis protein | SD1D_RS04830 | Not Available | Positive | 1050430 - 1051452 | 37327.2 |
| abc transporter substrate-binding protein | SD1D_RS04835 | Not Available | Positive | 1051733 - 1053181 | 53498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
