Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | SD1D_RS04590 | Not Available | Positive | 996746 - 998194 | 54865.9 |
| m16 family metallopeptidase | SD1D_RS04595 | Not Available | Positive | 998338 - 999567 | 46422.0 |
| threonine--trna ligase | SD1D_RS04600 | Not Available | Positive | 999928 - 1001892 | 75410.4 |
| hypothetical protein | SD1D_RS04605 | Not Available | Positive | 1002049 - 1002624 | 22521.0 |
| hypothetical protein | SD1D_RS04610 | Not Available | Positive | 1002629 - 1002916 | 10752.0 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | SD1D_RS04615 | Not Available | Positive | 1003081 - 1004355 | 46632.9 |
| aromatic acid exporter family protein | SD1D_RS04620 | Not Available | Positive | 1004518 - 1005636 | 43121.0 |
| clpp family protease | SD1D_RS04625 | Not Available | Positive | 1005754 - 1006569 | 30005.9 |
| ylzj-like family protein | SD1D_RS04630 | Not Available | Positive | 1006608 - 1006832 | 8648.28 |
| phospholipase d-like domain-containing protein | SD1D_RS04635 | Not Available | Positive | 1006875 - 1008287 | 55070.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
