Mycolicibacterium smegmatis strain NCTC8159

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium smegmatis strain NCTC8159 is a Gram-positive, rod-shaped bacterium that exists as single cells. This strain is classified as a chemoorganotroph, utilizing organic compounds as its energy source. It is an aerobic organism, requiring oxygen for its metabolic processes, and thrives best at an optimal temperature of 37.0°C, which aligns with the typical physiological conditions of many host-associated environments. As a member of the Mycolicibacterium genus, M. smegmatis is often studied for its relevance in various biological and medical contexts, particularly due to its association with host organisms. This bacterium is commonly found in environments such as skin, where it may play a role in the complex microbial communities present. The ability of M. smegmatis to adapt to aerobic conditions and utilize organic matter suggests its potential involvement in nutrient cycling within its habitats. The presence of M. smegmatis in host-associated environments highlights its ecological significance, as it may contribute to the maintenance of microbial diversity and the dynamics of host-microbe interactions. Further investigations could provide insights into its role in these ecosystems and its potential applications in biotechnology and microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium smegmatis
Strainstrain NCTC8159

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Mycolicibacterium smegmatis strain NCTC8159
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Mycolicibacterium smegmatis strain NCTC8159


Gene Summary

Adenine Count

1142177 bp

Thymine Count

1139335 bp

Guanine Count

2348832 bp

Cytosine Count

2352923 bp

Genome Length

6983267 bp

Protein-coding Genes

6634 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinAT701_RS05735Not Available+1227703 - 122815517318.5
Terminase large subunitAT701_RS05740Q9F5P4+1228148 - 1230961103715.0
Portal proteinAT701_RS05745O64207+1230958 - 123239753609.8
Capsid maturation proteaseAT701_RS05750Not Available+1232401 - 123309025843.2
Hypothetical proteinAT701_RS05755Not Available+1233132 - 123361417645.5
Major capsid proteinAT701_RS05760O64210+1233646 - 123454831539.3
Hypothetical proteinAT701_RS05765Not Available+1234568 - 123494513583.1
Hypothetical proteinAT701_RS05770Not Available+1235071 - 12352807653.11
Hypothetical proteinAT701_RS05775Not Available+1235280 - 123555510209.9
Minor tail proteinAT701_RS05780Not Available+1235558 - 123594713852.8

Displaying genes 1 – 10 of 6710 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

546 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000333(1R,4R)-bornane-2,5-dioneC10H14O2Chemical structure of (1R,4R)-bornane-2,5-dioneNot available
Average166.22Da
Monoisotopic166.0993797Da

Displaying 1–10 of 546 metabolites