Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain 1198/04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori strain 1198/04 Contig57, whole genome shotgun
Gene Summary
Adenine Count
492645 bp
Thymine Count
495317 bp
Guanine Count
312626 bp
Cytosine Count
317727 bp
Genome Length
1618345 bp
Protein-coding Genes
1485 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | HPY1198_04940 | Not Available | Positive | 1001304 - 1010870 | 348386.0 |
| abc transporter substrate-binding protein | HPY1198_04945 | Not Available | Negative | 1010930 - 1011430 | 18763.0 |
| abc transporter permease | HPY1198_04950 | Not Available | Negative | 1011447 - 1011686 | 8910.4 |
| abc transporter atp-binding protein | HPY1198_04955 | Not Available | Negative | 1011686 - 1012387 | 26482.0 |
| hypothetical protein | HPY1198_04960 | Not Available | Negative | 1012686 - 1013018 | 12876.5 |
| nad-dependent dna ligase liga | HPY1198_04965 | Not Available | Negative | 1013143 - 1015113 | 73985.2 |
| chemotaxis protein chev | HPY1198_04970 | Not Available | Positive | 1015189 - 1016130 | 35598.9 |
| aspartate--trna ligase | HPY1198_04975 | Not Available | Positive | 1016165 - 1017904 | 65673.7 |
| adenylate kinase | HPY1198_04980 | Not Available | Positive | 1017916 - 1018491 | 21414.8 |
| lipopolysaccharide biosynthesis protein | HPY1198_04985 | Not Available | Positive | 1018517 - 1019515 | 39296.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |






