Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain 1198/04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori strain 1198/04 Contig57, whole genome shotgun
Gene Summary
Adenine Count
492645 bp
Thymine Count
495317 bp
Guanine Count
312626 bp
Cytosine Count
317727 bp
Genome Length
1618345 bp
Protein-coding Genes
1485 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HPY1198_02180 | Not Available | Negative | 455046 - 457469 | 93304.2 |
| virb3 type iv secretion protein | HPY1198_02185 | Not Available | Negative | 457462 - 457728 | 10163.5 |
| virb2 type iv secretion protein | HPY1198_02190 | Not Available | Negative | 457729 - 458031 | 11458.5 |
| hypothetical protein | HPY1198_02195 | Not Available | Negative | 458028 - 459551 | 58905.1 |
| hypothetical protein | HPY1198_02200 | Not Available | Negative | 459558 - 459857 | 11870.8 |
| hypothetical protein | HPY1198_02210 | Not Available | Positive | 460865 - 462115 | 46857.1 |
| 5'-3' exonuclease | HPY1198_02215 | Not Available | Negative | 462123 - 462899 | 30451.8 |
| membrane protein | HPY1198_02220 | Not Available | Positive | 463051 - 463494 | 16482.4 |
| integrase | HPY1198_02225 | Not Available | Negative | 463906 - 465288 | 51191.5 |
| nuclease, enda/nucm family protein | HPY1198_02230 | Not Available | Negative | 465538 - 466797 | 49439.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |






