Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain 1198/04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori strain 1198/04 Contig57, whole genome shotgun
Gene Summary
Adenine Count
492645 bp
Thymine Count
495317 bp
Guanine Count
312626 bp
Cytosine Count
317727 bp
Genome Length
1618345 bp
Protein-coding Genes
1485 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | HPY1198_07815 | Not Available | Positive | 1588857 - 1589624 | 28366.0 |
| helicase | HPY1198_07820 | Not Available | Negative | 1589781 - 1590056 | 10507.6 |
| cytochrome c oxidase subunit ii | HPY1198_07825 | Not Available | Negative | 1590426 - 1594070 | 135102.0 |
| cag pathogenicity island protein | HPY1198_07830 | Not Available | Positive | 1594514 - 1594741 | 8963.1 |
| sodium:calcium antiporter | HPY1198_07835 | Not Available | Positive | 1594896 - 1595243 | 11959.9 |
| sodium:calcium antiporter | HPY1198_07840 | Not Available | Positive | 1595248 - 1595871 | 24055.0 |
| transporter | HPY1198_07845 | Not Available | Positive | 1595880 - 1598831 | 111939.0 |
| sodium:calcium antiporter | HPY1198_07850 | Not Available | Positive | 1598833 - 1599639 | 31817.4 |
| sodium:calcium antiporter | HPY1198_07855 | Not Available | Positive | 1599693 - 1600121 | 16016.2 |
| hypothetical protein | HPY1198_07860 | Not Available | Negative | 1600118 - 1600318 | 6758.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |






