Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain 1198/04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori strain 1198/04 Contig57, whole genome shotgun
Gene Summary
Adenine Count
492645 bp
Thymine Count
495317 bp
Guanine Count
312626 bp
Cytosine Count
317727 bp
Genome Length
1618345 bp
Protein-coding Genes
1485 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein | HPY1198_06940 | Not Available | Negative | 1419780 - 1420241 | 17514.9 |
| hypothetical protein | HPY1198_06945 | Not Available | Negative | 1420270 - 1420692 | 16020.5 |
| l-lysine exporter | HPY1198_06950 | Not Available | Positive | 1420956 - 1421588 | 23224.6 |
| dna polymerase iii subunits gamma and tau | HPY1198_06955 | Not Available | Positive | 1421657 - 1423390 | 65611.8 |
| hydrolase | HPY1198_06960 | Not Available | Positive | 1423387 - 1423788 | 15037.5 |
| abc transporter | HPY1198_06965 | Not Available | Positive | 1423801 - 1424523 | 26444.1 |
| rna polymerase sigma54 factor | HPY1198_06970 | Not Available | Positive | 1424526 - 1425770 | 48251.3 |
| fic family protein | HPY1198_06975 | Not Available | Negative | 1425782 - 1426216 | 16802.4 |
| competence protein comgf | HPY1198_06985 | Not Available | Negative | 1426485 - 1427705 | 47156.2 |
| hypothetical protein | HPY1198_06990 | Not Available | Negative | 1427898 - 1428257 | 13209.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |






