Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain 1198/04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori strain 1198/04 Contig57, whole genome shotgun
Gene Summary
Adenine Count
492645 bp
Thymine Count
495317 bp
Guanine Count
312626 bp
Cytosine Count
317727 bp
Genome Length
1618345 bp
Protein-coding Genes
1485 genes
Non-Coding Genes
41 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase cgta | HPY1198_00610 | Not Available | Positive | 136498 - 137580 | 38847.0 |
| alginate lyase | HPY1198_00615 | Not Available | Positive | 137617 - 138612 | 37587.7 |
| polyisoprenoid-binding protein | HPY1198_00620 | Not Available | Positive | 138852 - 139406 | 20431.9 |
| glutamate-1-semialdehyde aminotransferase | HPY1198_00625 | Not Available | Positive | 139416 - 140708 | 46751.3 |
| arginine biosynthesis protein argj | HPY1198_00630 | Not Available | Positive | 140713 - 140976 | 10055.5 |
| membrane protein | HPY1198_00635 | Not Available | Positive | 140992 - 141393 | 14951.8 |
| n-carbomoyl-d-amino acid amidohydrolase | HPY1198_00640 | Not Available | Positive | 141477 - 142361 | 32739.5 |
| polysaccharide deacetylase | HPY1198_00645 | Not Available | Positive | 142374 - 143255 | 33604.2 |
| hypothetical protein | HPY1198_00650 | Not Available | Positive | 143302 - 143679 | 14144.8 |
| atp-binding protein | HPY1198_00655 | Not Available | Positive | 143679 - 144641 | 35811.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |






