Candidatus Phaeomarinobacter ectocarpi strain Ec32

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Parvibaculaceae

Genus

Candidatus Phaeomarinibacter

Description

Candidatus Phaeomarinobacter ectocarpi strain Ec32 is characterized by a single replicon, indicating a streamlined genomic structure. This trait can be significant in understanding its genetic stability and adaptability in various environments. The strain is documented under the accession number NZ_HG966617.1, which provides a reference for its genomic sequence in biological databases. The simplicity of having one replicon may suggest a specialization that allows Candidatus Phaeomarinobacter ectocarpi strain Ec32 to thrive in specific ecological niches, potentially including marine environments associated with ectocarpus algae. Such a habitat could also imply a role in nutrient cycling, particularly in coastal or marine ecosystems where ectocarpus is prevalent. Understanding the genomic characteristics of Candidatus Phaeomarinobacter ectocarpi strain Ec32 may shed light on its ecological interactions and functional capabilities within its habitat. The presence of a singular replicon might enhance its efficiency in resource utilization, enabling it to respond to environmental changes effectively. This could also pose implications for its role in symbiotic relationships with marine organisms, where such traits could influence nutrient exchange and overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyParvibaculaceae
GenusCandidatus Phaeomarinibacter
SpeciesCandidatus Phaeomarinibacter ectocarpi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Phaeomarinobacter ectocarpi strain Ec32 chromosome I.

Gene Summary

Adenine Count

720634 bp

Thymine Count

683548 bp

Guanine Count

971016 bp

Cytosine Count

1038542 bp

Genome Length

3415905 bp

Protein-coding Genes

3217 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinBN1012_RS14690Not AvailableNegative3087111 - 308786026135.4
arylesteraseBN1012_RS14695Not AvailablePositive3088000 - 308866522922.0
nadp(h)-dependent aldo-keto reductaseBN1012_RS14700Not AvailablePositive3088814 - 308985439074.2
rna 2',3'-cyclic phosphodiesteraseBN1012_RS14705Not AvailablePositive3090093 - 309064120127.5
4a-hydroxytetrahydrobiopterin dehydrataseBN1012_RS14710Not AvailablePositive3090682 - 309097210700.6
class i sam-dependent methyltransferaseBN1012_RS14715Not AvailableNegative3090987 - 309165523438.2
marr family winged helix-turn-helix transcriptional regulatorBN1012_RS14720Not AvailablePositive3091792 - 309235819968.3
voc family proteinBN1012_RS14725Not AvailableNegative3092890 - 309325812709.1
voc family proteinBN1012_RS14730Not AvailableNegative3093410 - 309377812966.6
sdr family nad(p)-dependent oxidoreductaseBN1012_RS14735Not AvailableNegative3093957 - 309473926905.3

Displaying genes 2951 – 2960 of 3292 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.