Escherichia coli O25b:H4-ST131 strain EC958

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O25b:H4-ST131 strain EC958 is a notable strain of E. coli characterized by its rod shape and Gram-negative cell wall structure. This strain is classified as a heterotroph, meaning it derives energy from organic compounds. It exists as single cells and possesses flagella, which contribute to its mobility. EC958 is an aerobic organism, requiring oxygen for its metabolic processes, and thrives optimally at 37°C, which is within its mesophilic temperature range. The strain has a complex genetic makeup, containing three replicons and two membranes, indicating its adaptability and potential for diverse metabolic functions. EC958 is free-living, which suggests it can exist independently in various environments, making it capable of colonizing multiple habitats. The presence of strain EC958 within the E. coli O25b:H4-ST131 lineage underscores its significance in microbial ecology and public health, particularly in its association with antibiotic resistance. Understanding its traits can provide insights into its role in human health, environmental interactions, and potential pathogenicity. The strain's adaptability and metabolic versatility may contribute to its success in various niches, highlighting the importance of studying such microorganisms within their ecological contexts. Accessions for this strain include NZ_HG941718, NZ_HG941719.1, and NZ_HG941718.1, which can be used for further genomic and functional analyses.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO25b:H4-ST131 strain EC958

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O25b:H4-ST131 strain EC958
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Escherichia coli O25b:H4-ST131 strain EC958


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

141 genes

Non-Coding Genes

19 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein trbeEC958_RS25885Not AvailablePositive47133 - 473909692.78
type-f conjugative transfer system pilin assembly protein trafEC958_RS25890Not AvailablePositive47383 - 4812627976.6
conjugal transfer protein trbaEC958_RS25895Not AvailablePositive48140 - 4848412570.8
type-f conjugative transfer system pilin chaperone traqEC958_RS25900Not AvailablePositive48603 - 4888710830.3
type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbbEC958_RS25905Not AvailablePositive48874 - 4941920061.3
p-type conjugative transfer protein trbjEC958_RS25910Not AvailablePositive49349 - 4969612944.0
f-type conjugal transfer protein trbfEC958_RS25915Not AvailablePositive49677 - 5006915698.1
conjugal transfer pilus assembly protein trahEC958_RS25920Not AvailablePositive50056 - 5142950236.3
conjugal transfer mating-pair stabilization protein tragEC958_RS25925Not AvailablePositive51426 - 54248102967.0
hypothetical proteinEC958_RS25930Not AvailablePositive54264 - 5474918586.7

Displaying genes 61 – 70 of 5194 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Urinary tract infectionsCausesPMC3789825
Bloodstream infectionsCausesPMC3789825
Acute pyelonephritisCausesPMC3789825
OsteomyelitisCausesPMC3789825
Septic arthritisCausesPMC3789825
Septic shockCausesPMC3789825

Displaying health effects 1 – 6 of 6 in total