Clostridium bornimense strain M2/40

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium bornimense strain M2/40 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic aligns with the Clostridia class, which is known for its oxygen-sensitive species that often inhabit anaerobic habitats such as soil, sediments, and the gastrointestinal tracts of various animals. The strain M2/40 is notable for possessing two replicons, which suggests a complex genetic structure that may contribute to its adaptability and potential for horizontal gene transfer. The presence of multiple replicons can facilitate the maintenance of plasmids or other genetic elements that may provide advantageous traits, including those related to metabolism or resistance to environmental stressors. The genetic information for Clostridium bornimense strain M2/40 is cataloged under the accession numbers NZ_HG917868.1 and NZ_HG917869.1. These sequences can provide insights into the strain's genomic features and potential functional capabilities, aiding in further research and understanding of its biology. From a biological and ecological perspective, the anaerobic nature of Clostridium bornimense strain M2/40 suggests that it plays a role in anaerobic degradation processes, possibly contributing to nutrient cycling in its native habitat. Its dual replicons may enhance its capacity to adapt to various anaerobic environments, allowing it to thrive in diverse ecological niches and participate in important biochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium bornimense
Strainstrain M2/40

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium bornimense strain M2/40 chromosome M2/40_rep1,

Gene Summary

Adenine Count

1010974 bp

Thymine Count

1038064 bp

Guanine Count

423879 bp

Cytosine Count

444947 bp

Genome Length

2917864 bp

Protein-coding Genes

2545 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinCM240_RS11910Not AvailableNegative2634224 - 263548048428.5
dutp diphosphataseCM240_RS11915Not AvailableNegative2635458 - 263589215707.1
phosphoenolpyruvate--protein phosphotransferaseCM240_RS11920Not AvailableNegative2636211 - 263783059512.9
sigma 54-interacting transcriptional regulatorCM240_RS11925Not AvailablePositive2638142 - 264013674450.6
n-acetylmuramoyl-l-alanine amidaseCM240_RS11930Not AvailableNegative2640199 - 264090326462.7
na/pi cotransporter family proteinCM240_RS11935Not AvailableNegative2640966 - 264257358633.1
30s ribosomal protein s9CM240_RS11940Not AvailableNegative2642702 - 264309414769.2
50s ribosomal protein l13CM240_RS11945Not AvailableNegative2643121 - 264355516290.1
trna pseudouridine(38-40) synthase truaCM240_RS11950Not AvailableNegative2643777 - 264451127667.3
energy-coupling factor transporter transmembrane component t family proteinCM240_RS11955Not AvailableNegative2644515 - 264532730665.1

Displaying genes 2431 – 2440 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.