Clostridium bornimense strain M2/40

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium bornimense strain M2/40 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic aligns with the Clostridia class, which is known for its oxygen-sensitive species that often inhabit anaerobic habitats such as soil, sediments, and the gastrointestinal tracts of various animals. The strain M2/40 is notable for possessing two replicons, which suggests a complex genetic structure that may contribute to its adaptability and potential for horizontal gene transfer. The presence of multiple replicons can facilitate the maintenance of plasmids or other genetic elements that may provide advantageous traits, including those related to metabolism or resistance to environmental stressors. The genetic information for Clostridium bornimense strain M2/40 is cataloged under the accession numbers NZ_HG917868.1 and NZ_HG917869.1. These sequences can provide insights into the strain's genomic features and potential functional capabilities, aiding in further research and understanding of its biology. From a biological and ecological perspective, the anaerobic nature of Clostridium bornimense strain M2/40 suggests that it plays a role in anaerobic degradation processes, possibly contributing to nutrient cycling in its native habitat. Its dual replicons may enhance its capacity to adapt to various anaerobic environments, allowing it to thrive in diverse ecological niches and participate in important biochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium bornimense
Strainstrain M2/40

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium bornimense strain M2/40 chromosome M2/40_rep1,

Gene Summary

Adenine Count

1010974 bp

Thymine Count

1038064 bp

Guanine Count

423879 bp

Cytosine Count

444947 bp

Genome Length

2917864 bp

Protein-coding Genes

2545 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-4-dehydrorhamnose 3,5-epimeraseCM240_RS11860Not AvailableNegative2623252 - 262380921480.4
dtdp-glucose 4,6-dehydrataseCM240_RS11865Not AvailableNegative2623828 - 262488340280.6
glucose-1-phosphate thymidylyltransferase rfbaCM240_RS11870Not AvailableNegative2624901 - 262576732231.8
phosphoglucosamine mutaseCM240_RS11875Not AvailableNegative2625872 - 262722149107.4
butyrate kinaseCM240_RS11880Not AvailableNegative2627514 - 262858138140.9
phosphate butyryltransferaseCM240_RS11885Not AvailableNegative2628604 - 262951832636.5
nad(p)/fad-dependent oxidoreductaseCM240_RS11890Not AvailableNegative2629807 - 263140258936.0
ybbr-like domain-containing proteinCM240_RS11895Not AvailableNegative2631402 - 263262244929.6
diadenylate cyclase cdaaCM240_RS11900Not AvailableNegative2632592 - 263344331618.3
cell wall hydrolaseCM240_RS11905Not AvailablePositive2633626 - 263414418850.5

Displaying genes 2421 – 2430 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.