Clostridium bornimense strain M2/40

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium bornimense strain M2/40 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic aligns with the Clostridia class, which is known for its oxygen-sensitive species that often inhabit anaerobic habitats such as soil, sediments, and the gastrointestinal tracts of various animals. The strain M2/40 is notable for possessing two replicons, which suggests a complex genetic structure that may contribute to its adaptability and potential for horizontal gene transfer. The presence of multiple replicons can facilitate the maintenance of plasmids or other genetic elements that may provide advantageous traits, including those related to metabolism or resistance to environmental stressors. The genetic information for Clostridium bornimense strain M2/40 is cataloged under the accession numbers NZ_HG917868.1 and NZ_HG917869.1. These sequences can provide insights into the strain's genomic features and potential functional capabilities, aiding in further research and understanding of its biology. From a biological and ecological perspective, the anaerobic nature of Clostridium bornimense strain M2/40 suggests that it plays a role in anaerobic degradation processes, possibly contributing to nutrient cycling in its native habitat. Its dual replicons may enhance its capacity to adapt to various anaerobic environments, allowing it to thrive in diverse ecological niches and participate in important biochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium bornimense
Strainstrain M2/40

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium bornimense strain M2/40 chromosome M2/40_rep1,

Gene Summary

Adenine Count

1010974 bp

Thymine Count

1038064 bp

Guanine Count

423879 bp

Cytosine Count

444947 bp

Genome Length

2917864 bp

Protein-coding Genes

2545 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidophosphoribosyltransferaseCM240_RS10590Not AvailableNegative2363073 - 236447951085.6
phosphoribosylaminoimidazolesuccinocarboxamide synthaseCM240_RS10595Not AvailableNegative2364481 - 236519427031.5
5-(carboxyamino)imidazole ribonucleotide mutaseCM240_RS10600Not AvailableNegative2365194 - 236567317074.9
four helix bundle proteinCM240_RS10605Not AvailableNegative2365727 - 236609514278.3
phosphoribosylformylglycinamidine synthaseCM240_RS10610Not AvailableNegative2366340 - 2370101139188.0
degv family proteinCM240_RS10615Not AvailablePositive2370382 - 237122731192.7
diaminopimelate epimeraseCM240_RS10620Not AvailableNegative2371760 - 237271935761.8
m3 family oligoendopeptidaseCM240_RS10625Not AvailableNegative2372776 - 237455467773.9
hypothetical proteinCM240_RS10630Not AvailableNegative2374725 - 237500911031.2
deoxynucleoside kinaseCM240_RS10635Not AvailableNegative2375166 - 237581325707.0

Displaying genes 2161 – 2170 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.