Clostridium bornimense strain M2/40

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium bornimense strain M2/40 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic aligns with the Clostridia class, which is known for its oxygen-sensitive species that often inhabit anaerobic habitats such as soil, sediments, and the gastrointestinal tracts of various animals. The strain M2/40 is notable for possessing two replicons, which suggests a complex genetic structure that may contribute to its adaptability and potential for horizontal gene transfer. The presence of multiple replicons can facilitate the maintenance of plasmids or other genetic elements that may provide advantageous traits, including those related to metabolism or resistance to environmental stressors. The genetic information for Clostridium bornimense strain M2/40 is cataloged under the accession numbers NZ_HG917868.1 and NZ_HG917869.1. These sequences can provide insights into the strain's genomic features and potential functional capabilities, aiding in further research and understanding of its biology. From a biological and ecological perspective, the anaerobic nature of Clostridium bornimense strain M2/40 suggests that it plays a role in anaerobic degradation processes, possibly contributing to nutrient cycling in its native habitat. Its dual replicons may enhance its capacity to adapt to various anaerobic environments, allowing it to thrive in diverse ecological niches and participate in important biochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium bornimense
Strainstrain M2/40

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium bornimense strain M2/40 chromosome M2/40_rep1,

Gene Summary

Adenine Count

1010974 bp

Thymine Count

1038064 bp

Guanine Count

423879 bp

Cytosine Count

444947 bp

Genome Length

2917864 bp

Protein-coding Genes

2545 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnCM240_RS09480Not AvailableNegative2107064 - 210811640186.8
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbCM240_RS09485Not AvailableNegative2108134 - 210945350170.4
methionyl-trna formyltransferaseCM240_RS09490Not AvailableNegative2109450 - 211037934537.1
peptide deformylaseCM240_RS09495Not AvailableNegative2110384 - 211083316744.4
primosomal protein n'CM240_RS09500Not AvailableNegative2110870 - 211307184258.2
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcCM240_RS09505Not AvailableNegative2113126 - 211431643862.3
dna-directed rna polymerase subunit omegaCM240_RS09510Not AvailableNegative2114346 - 21145648138.75
guanylate kinaseCM240_RS09515Not AvailableNegative2114557 - 211518623588.2
extracellular matrix/biofilm regulator remaCM240_RS09520Not AvailableNegative2115186 - 21154619937.99
yicc/yloc family endoribonucleaseCM240_RS09525Not AvailableNegative2115477 - 211636133613.4

Displaying genes 1941 – 1950 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.