Clostridium bornimense strain M2/40

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium bornimense strain M2/40 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic aligns with the Clostridia class, which is known for its oxygen-sensitive species that often inhabit anaerobic habitats such as soil, sediments, and the gastrointestinal tracts of various animals. The strain M2/40 is notable for possessing two replicons, which suggests a complex genetic structure that may contribute to its adaptability and potential for horizontal gene transfer. The presence of multiple replicons can facilitate the maintenance of plasmids or other genetic elements that may provide advantageous traits, including those related to metabolism or resistance to environmental stressors. The genetic information for Clostridium bornimense strain M2/40 is cataloged under the accession numbers NZ_HG917868.1 and NZ_HG917869.1. These sequences can provide insights into the strain's genomic features and potential functional capabilities, aiding in further research and understanding of its biology. From a biological and ecological perspective, the anaerobic nature of Clostridium bornimense strain M2/40 suggests that it plays a role in anaerobic degradation processes, possibly contributing to nutrient cycling in its native habitat. Its dual replicons may enhance its capacity to adapt to various anaerobic environments, allowing it to thrive in diverse ecological niches and participate in important biochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium bornimense
Strainstrain M2/40

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium bornimense strain M2/40 chromosome M2/40_rep1,

Gene Summary

Adenine Count

1010974 bp

Thymine Count

1038064 bp

Guanine Count

423879 bp

Cytosine Count

444947 bp

Genome Length

2917864 bp

Protein-coding Genes

2545 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrCM240_RS07860Not AvailableNegative1751608 - 175214119793.2
rlua family pseudouridine synthaseCM240_RS07865Not AvailableNegative1752312 - 175322334059.2
signal peptidase iiCM240_RS07870Not AvailableNegative1753195 - 175366817917.5
trar/dksa c4-type zinc finger proteinCM240_RS07875Not AvailableNegative1753682 - 175426322227.6
5'-methylthioadenosine/adenosylhomocysteine nucleosidaseCM240_RS07880Not AvailableNegative1754334 - 175502324921.3
diviva domain-containing proteinCM240_RS07885Not AvailableNegative1755071 - 175575126550.4
rna-binding proteinCM240_RS07890Not AvailableNegative1755764 - 175653429219.6
cell division protein sepfCM240_RS07895Not AvailableNegative1756538 - 175700217492.4
yggs family pyridoxal phosphate-dependent enzymeCM240_RS07900Not AvailableNegative1757014 - 175766725189.8
duf881 domain-containing proteinCM240_RS07905Not AvailableNegative1757761 - 175846826766.2

Displaying genes 1611 – 1620 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.