Rhizobium favelukesii strain LPU83

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium favelukesii strain LPU83 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This strain is notable for possessing two replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The genetic material of R. favelukesii strain LPU83 can be accessed through two specific accession numbers: NZ_HG916852.1 and NZ_HG916855.1, which provide a basis for further research and exploration of its genomic features. As a member of the Rhizobiaceae family, R. favelukesii strain LPU83 is likely involved in symbiotic relationships with leguminous plants, a trait common among Rhizobium species. This symbiosis is crucial for nitrogen fixation, a process that enriches soil fertility and supports plant growth. The ability of this strain to engage in such relationships underscores the ecological significance of Rhizobium species in promoting sustainable agricultural practices. In summary, Rhizobium favelukesii strain LPU83, with its rod shape, flagella presence, and unique genomic characteristics, presents potential for beneficial interactions with plants. Its role in nitrogen fixation could have important implications for soil health and agricultural productivity, highlighting the ecological value of this bacterial strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium favelukesii
Strainstrain LPU83

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium favelukesii strain LPU83
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoils
Biotic relationshipNot Available
Host(s)Phaseolus vulgaris, Medicago, Melilotus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium favelukesii strain LPU83 chromosome, complete genome.

Gene Summary

Adenine Count

837659 bp

Thymine Count

832653 bp

Guanine Count

1260028 bp

Cytosine Count

1264965 bp

Genome Length

4195305 bp

Protein-coding Genes

4062 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine-type recombinase/integraseLPU83_RS71770Not AvailableNegative1733151 - 173436546053.0
aldo/keto reductaseLPU83_RS71775Not AvailableNegative1734869 - 173590636952.9
tetr/acrr family transcriptional regulatorLPU83_RS71780Not AvailablePositive1736038 - 173660720168.9
type ii toxin-antitoxin system rele/pare family toxinLPU83_RS71785Not AvailableNegative1736971 - 173729711675.1
type ii toxin-antitoxin system pard family antitoxinLPU83_RS71790Not AvailableNegative1737297 - 17375429036.78
voc family proteinLPU83_RS71795Not AvailablePositive1738045 - 173905436431.2
res family nad+ phosphorylaseLPU83_RS71800Not AvailableNegative1739108 - 173977924635.2
mbca/pars/xre antitoxin family proteinLPU83_RS71805Not AvailableNegative1739776 - 174029419223.0
shoct domain-containing proteinLPU83_RS71815Not AvailableNegative1741107 - 174186226563.1
ornithine cyclodeaminase family proteinLPU83_RS71820Not AvailableNegative1742606 - 174357734792.9

Displaying genes 5921 – 5930 of 6110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.