Rhizobium favelukesii strain LPU83

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium favelukesii strain LPU83 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This strain is notable for possessing two replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The genetic material of R. favelukesii strain LPU83 can be accessed through two specific accession numbers: NZ_HG916852.1 and NZ_HG916855.1, which provide a basis for further research and exploration of its genomic features. As a member of the Rhizobiaceae family, R. favelukesii strain LPU83 is likely involved in symbiotic relationships with leguminous plants, a trait common among Rhizobium species. This symbiosis is crucial for nitrogen fixation, a process that enriches soil fertility and supports plant growth. The ability of this strain to engage in such relationships underscores the ecological significance of Rhizobium species in promoting sustainable agricultural practices. In summary, Rhizobium favelukesii strain LPU83, with its rod shape, flagella presence, and unique genomic characteristics, presents potential for beneficial interactions with plants. Its role in nitrogen fixation could have important implications for soil health and agricultural productivity, highlighting the ecological value of this bacterial strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium favelukesii
Strainstrain LPU83

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium favelukesii strain LPU83
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoils
Biotic relationshipNot Available
Host(s)Phaseolus vulgaris, Medicago, Melilotus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium favelukesii strain LPU83 chromosome, complete genome.

Gene Summary

Adenine Count

837659 bp

Thymine Count

832653 bp

Guanine Count

1260028 bp

Cytosine Count

1264965 bp

Genome Length

4195305 bp

Protein-coding Genes

4062 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor histidine kinaseLPU83_RS38430Not AvailableNegative36539 - 3830265189.3
response regulator transcription factorLPU83_RS38435Not AvailableNegative38409 - 3914027288.9
phosphoenolpyruvate carboxykinaseLPU83_RS38440Not AvailablePositive39481 - 4109157944.7
alternative ribosome rescue aminoacyl-trna hydrolase arfbLPU83_RS38445Not AvailablePositive41188 - 4162216138.6
alpha-ketoglutarate-dependent dioxygenase alkbLPU83_RS38450Not AvailablePositive41624 - 4223522312.1
type i pantothenate kinaseLPU83_RS38455Not AvailableNegative42232 - 4322737797.4
phosphoribosyl-atp diphosphataseLPU83_RS38460Not AvailableNegative43224 - 4354711554.8
imidazole glycerol phosphate synthase subunit hisfLPU83_RS38465Not AvailableNegative43563 - 4435127881.2
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseLPU83_RS38470Not AvailableNegative44348 - 4509726136.6
imidazole glycerol phosphate synthase subunit hishLPU83_RS38475Not AvailableNegative45124 - 4577423032.6

Displaying genes 221 – 230 of 6110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.