Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium agaricidamnosum NBRC 102515, also known as DSM 9628, is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism exhibits mobility, which is attributed to the presence of flagella. It contains a single replicon, indicating a streamlined genomic structure. The accession number NZ_HG322949.1 is associated with its genetic information, reflecting the organism's specific genomic characteristics. Janthinobacterium agaricidamnosum is notable for its ecological role, particularly in association with fungi, where it has been observed to exhibit antifungal properties. This interaction suggests a potential for biocontrol applications in agriculture or environmental management, particularly in reducing fungal pathogens. Overall, the traits of Janthinobacterium agaricidamnosum highlight its adaptability and significance in microbial ecology, especially concerning its interactions with other organisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium agaricidamnosum
StrainNBRC 102515 = DSM 9628

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

Gene Summary

Adenine Count

1153787 bp

Thymine Count

1161815 bp

Guanine Count

1815854 bp

Cytosine Count

1815888 bp

Genome Length

5949001 bp

Protein-coding Genes

5196 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase subunit betaGJA_RS23195Not AvailableNegative5373410 - 5377516152723.0
50s ribosomal protein l7/l12GJA_RS23200Not AvailableNegative5377757 - 537812812465.0
50s ribosomal protein l10GJA_RS23205Not AvailableNegative5378196 - 537873218231.1
50s ribosomal protein l1GJA_RS23210Not AvailableNegative5379053 - 537974824041.3
50s ribosomal protein l11GJA_RS23215Not AvailableNegative5379748 - 538018215043.7
transcription termination/antitermination protein nusgGJA_RS23220Not AvailableNegative5380297 - 538092323110.5
preprotein translocase subunit seceGJA_RS23225Not AvailableNegative5380923 - 538130613764.2
Trna-trpNot AvailableNot AvailablePositive5381338 - 5381413Not Available
Trna-thrNot AvailableNot AvailablePositive5381620 - 5381694Not Available
Trna-glyNot AvailableNot AvailablePositive5381740 - 5381813Not Available

Displaying genes 4741 – 4750 of 5280 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.