Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium agaricidamnosum NBRC 102515, also known as DSM 9628, is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism exhibits mobility, which is attributed to the presence of flagella. It contains a single replicon, indicating a streamlined genomic structure. The accession number NZ_HG322949.1 is associated with its genetic information, reflecting the organism's specific genomic characteristics. Janthinobacterium agaricidamnosum is notable for its ecological role, particularly in association with fungi, where it has been observed to exhibit antifungal properties. This interaction suggests a potential for biocontrol applications in agriculture or environmental management, particularly in reducing fungal pathogens. Overall, the traits of Janthinobacterium agaricidamnosum highlight its adaptability and significance in microbial ecology, especially concerning its interactions with other organisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium agaricidamnosum
StrainNBRC 102515 = DSM 9628

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

Gene Summary

Adenine Count

1153787 bp

Thymine Count

1161815 bp

Guanine Count

1815854 bp

Cytosine Count

1815888 bp

Genome Length

5949001 bp

Protein-coding Genes

5196 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
valine--trna ligaseGJA_RS21255Not AvailablePositive4947879 - 4950686104589.0
duf2147 domain-containing proteinGJA_RS21260Not AvailablePositive4950759 - 495121416610.0
yaii/yqxd family proteinGJA_RS21265Not AvailableNegative4951256 - 495172016774.1
holliday junction branch migration dna helicase ruvbGJA_RS21270Not AvailableNegative4951720 - 495277538488.4
holliday junction branch migration protein ruvaGJA_RS21275Not AvailableNegative4952790 - 495336820167.9
crossover junction endodeoxyribonuclease ruvcGJA_RS21280Not AvailableNegative4953414 - 495395318366.7
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseGJA_RS21285Not AvailableNegative4954147 - 495573356421.6
helix-turn-helix domain-containing proteinGJA_RS21290Not AvailableNegative4955892 - 49561258759.55
trna dihydrouridine synthase dusbGJA_RS21295Not AvailableNegative4956240 - 495726838154.7
histidine phosphatase family proteinGJA_RS21300Not AvailableNegative4957384 - 495802823551.8

Displaying genes 4341 – 4350 of 5280 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.