Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium agaricidamnosum NBRC 102515, also known as DSM 9628, is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism exhibits mobility, which is attributed to the presence of flagella. It contains a single replicon, indicating a streamlined genomic structure. The accession number NZ_HG322949.1 is associated with its genetic information, reflecting the organism's specific genomic characteristics. Janthinobacterium agaricidamnosum is notable for its ecological role, particularly in association with fungi, where it has been observed to exhibit antifungal properties. This interaction suggests a potential for biocontrol applications in agriculture or environmental management, particularly in reducing fungal pathogens. Overall, the traits of Janthinobacterium agaricidamnosum highlight its adaptability and significance in microbial ecology, especially concerning its interactions with other organisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium agaricidamnosum
StrainNBRC 102515 = DSM 9628

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

Gene Summary

Adenine Count

1153787 bp

Thymine Count

1161815 bp

Guanine Count

1815854 bp

Cytosine Count

1815888 bp

Genome Length

5949001 bp

Protein-coding Genes

5196 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinGJA_RS21205Not AvailableNegative4937869 - 493878333211.6
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseGJA_RS21210Not AvailableNegative4939012 - 494011839622.8
antar domain-containing response regulatorGJA_RS21215Not AvailableNegative4940186 - 494082122898.5
thiamine phosphate synthaseGJA_RS21220Not AvailableNegative4940899 - 494151021444.0
hydroxymethylpyrimidine/phosphomethylpyrimidine kinaseGJA_RS21225Not AvailableNegative4941531 - 494231626831.5
thiazole synthaseGJA_RS21230Not AvailableNegative4942313 - 494312228735.0
sulfur carrier protein thisGJA_RS21235Not AvailableNegative4943138 - 49433417386.02
phosphomethylpyrimidine synthase thicGJA_RS21240Not AvailableNegative4943358 - 494527170803.8
porinGJA_RS21245Not AvailableNegative4945552 - 494659836568.1
hypothetical proteinGJA_RS21250Not AvailablePositive4946972 - 494767025604.8

Displaying genes 4331 – 4340 of 5280 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.