Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium agaricidamnosum NBRC 102515, also known as DSM 9628, is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism exhibits mobility, which is attributed to the presence of flagella. It contains a single replicon, indicating a streamlined genomic structure. The accession number NZ_HG322949.1 is associated with its genetic information, reflecting the organism's specific genomic characteristics. Janthinobacterium agaricidamnosum is notable for its ecological role, particularly in association with fungi, where it has been observed to exhibit antifungal properties. This interaction suggests a potential for biocontrol applications in agriculture or environmental management, particularly in reducing fungal pathogens. Overall, the traits of Janthinobacterium agaricidamnosum highlight its adaptability and significance in microbial ecology, especially concerning its interactions with other organisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium agaricidamnosum
StrainNBRC 102515 = DSM 9628

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

Gene Summary

Adenine Count

1153787 bp

Thymine Count

1161815 bp

Guanine Count

1815854 bp

Cytosine Count

1815888 bp

Genome Length

5949001 bp

Protein-coding Genes

5196 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2325 domain-containing proteinGJA_RS16845Not AvailablePositive3950720 - 395193444669.6
oxidoreductaseGJA_RS16850Not AvailablePositive3952151 - 395300229729.9
tetr/acrr family transcriptional regulatorGJA_RS16855Not AvailablePositive3953101 - 395367621009.3
sulfite reductase subunit alphaGJA_RS16860Not AvailableNegative3953686 - 395505049681.4
fad:protein fmn transferaseGJA_RS16865Not AvailableNegative3955047 - 395605436061.8
duf4198 domain-containing proteinGJA_RS16870Not AvailableNegative3956076 - 395689729653.5
duf2271 domain-containing proteinGJA_RS16875Not AvailableNegative3956917 - 395743218863.9
pepsy-associated tm helix domain-containing proteinGJA_RS16880Not AvailableNegative3957454 - 395811924464.5
duf2239 family proteinGJA_RS16885Not AvailablePositive3958494 - 395906920860.0
hypothetical proteinGJA_RS16890Not AvailableNegative3959097 - 39593669186.24

Displaying genes 3441 – 3450 of 5280 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.