Formosa agariphila KMM 3901 strain type strain: KMM 3901

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Formosa

Description

Formosa agariphila KMM 3901 is a Gram-negative bacterium characterized by its rod-shaped morphology and motility. This strain is notable for its facultative aerobic and anaerobic respiration capabilities, allowing it to thrive in varying oxygen conditions. It is classified as psychrotolerant, with an optimal growth temperature of 16°C, indicating its ability to survive and grow in cooler environments. The strain KMM 3901 possesses a single replicon and does not form spores, which suggests a reliance on vegetative growth for reproduction and survival. The accession number for this strain is NZ_HG315671.1, which provides a reference for genomic information. The psychrotolerant nature of Formosa agariphila KMM 3901 highlights its potential ecological role in cold environments, such as polar regions or deep-sea habitats. Its ability to adapt to lower temperatures may allow it to participate in nutrient cycling and organic matter degradation in these ecosystems, contributing to the overall microbial diversity and functionality of cold habitats. Understanding such traits can provide insights into the adaptability and ecological significance of microbial life in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFormosa
SpeciesFormosa agariphila
StrainKMM 3901 strain type strain: KMM 3901

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Formosa agariphila KMM 3901 strain type strain: KMM 3901

Gene Summary

Adenine Count

1394564 bp

Thymine Count

1403215 bp

Guanine Count

695407 bp

Cytosine Count

711668 bp

Genome Length

4228350 bp

Protein-coding Genes

3545 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 2 tim barrel-domain containing proteinBN863_RS13155Not AvailablePositive3152835 - 3156173127084.0
carbohydrate-binding family 9-like proteinBN863_RS13160Not AvailablePositive3156201 - 315683924522.1
hypothetical proteinBN863_RS13165Not AvailableNegative3156922 - 315765027236.2
hypothetical proteinBN863_RS18695Not AvailableNegative3157616 - 315796313028.5
glycine c-acetyltransferaseBN863_RS13170Not AvailableNegative3157973 - 315916343591.3
nad-dependent epimerase/dehydratase family proteinBN863_RS13175Not AvailableNegative3159185 - 316015636577.4
lrp/asnc family transcriptional regulatorBN863_RS13180Not AvailablePositive3160317 - 316077817918.8
two-component regulator propeller domain-containing proteinBN863_RS13185Not AvailableNegative3160775 - 3164860155725.0
gfo/idh/moca family proteinBN863_RS13190Not AvailablePositive3165124 - 316648250626.1
tonb-dependent receptorBN863_RS13195Not AvailablePositive3166515 - 3169445108088.0

Displaying genes 2691 – 2700 of 3622 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001415beta-L-rhamnoseC6H12O5Chemical structure of beta-L-rhamnoseNot available
Average164.1565Da
Monoisotopic164.0684735Da
BASm0001463alpha-L-rhamnoseC6H12O5Chemical structure of alpha-L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.068473494Da
BASm00031102-dehydro-3-deoxy-D-galactonateC6H10O6Chemical structure of 2-dehydro-3-deoxy-D-galactonateNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.